Sequence-specific Ni (II)-dependent peptide bond hydrolysis for protein engineering: Active sequence optimization
AM Protas, HHN Ariani, A Bonna… - Journal of inorganic …, 2013 - Elsevier
… has been an issue of interest in protein biotechnology. We thoroughly studied the hydrolysis
assisted by Ni(II) ions in R N –(Ser/Thr)–Xaa–His–Zaa–R C peptide sequences. First, we …
assisted by Ni(II) ions in R N –(Ser/Thr)–Xaa–His–Zaa–R C peptide sequences. First, we …
Sequence-specific Ni (II)-dependent peptide bond hydrolysis for protein engineering. Combinatorial library determination of optimal sequences
A Krezel, E Kopera, AM Protas… - Journal of the …, 2010 - ACS Publications
… sequence-specific cleavage of the peptide bond is a crucial procedure in protein engineering
… among metal ions and their complexes included redox-active metal ions. They can cleave …
… among metal ions and their complexes included redox-active metal ions. They can cleave …
Human annexins A1, A2, and A8 as potential molecular targets for Ni (II) ions
NE Wezynfeld, K Bossak, W Goch… - Chemical Research …, 2014 - ACS Publications
… with the Ni(II)-dependent peptide bond hydrolysis, which … the hydrolysis reaction we used
the iterative optimization algorithm … Low-spin 4N complexes are hydrolytically active species. …
the iterative optimization algorithm … Low-spin 4N complexes are hydrolytically active species. …
[HTML][HTML] Ni (II) ions may target the entire melatonin biosynthesis pathway—a plausible mechanism of nickel toxicity
… Ni(II)-assisted peptide bond hydrolysis of the tested peptides. … peptides in the 4N hydrolytically
active complex (Table 2) and … geometry optimization using a Dreiding-like forcefield [43]. …
active complex (Table 2) and … geometry optimization using a Dreiding-like forcefield [43]. …
Refinement of the Fusion Tag PagP for Effective Formation of Inclusion Bodies in Escherichia coli
X Li, B Zhang, Q Hu, C Chen, J Huang, L Liu… - Microbiology …, 2023 - Am Soc Microbiol
… proteins to be hydrolyzed site-specifically by Ni 2+ ions; motif … optimized amino acid
sequence has been developed for Ni (… )-dependent peptide bond hydrolysis (39), a His 6 tag (…
sequence has been developed for Ni (… )-dependent peptide bond hydrolysis (39), a His 6 tag (…
Purification of proteins with native terminal sequences using a Ni (II)-cleavable C-terminal hexahistidine affinity tag
HAH Abd Elhameed, B Hajdu, RK Balogh… - Protein Expression and …, 2019 - Elsevier
… protein chemistry as exemplified by recent reviews [17,20,21,25,[35], [36], [37], [38], [39], [40],
[41]]. The peptide bond hydrolysis initiated by Ni(II… can be optimized for each target protein. …
[41]]. The peptide bond hydrolysis initiated by Ni(II… can be optimized for each target protein. …
[HTML][HTML] Targeted expression, purification, and cleavage of fusion proteins from inclusion bodies in Escherichia coli
… ion-catalyzed peptide bond cleavage … sequence-specific metal ion-catalyzed cleavage
show great promise, but further work is needed to fully delineate not only the optimal sequences …
show great promise, but further work is needed to fully delineate not only the optimal sequences …
Artificial metalloenzymes: Recent developments and innovations in bioinorganic catalysis
Z Thompson, JA Cowan - Small, 2020 - Wiley Online Library
… Advanced protein engineering of enzymes derived from extremophiles is also … the hydrolysis
of peptide bonds. [ 26 ] This specific Pd(II)–CD complex was shown to be sequence specific, …
of peptide bonds. [ 26 ] This specific Pd(II)–CD complex was shown to be sequence specific, …
Artificial metalloenzymes and metallopeptide catalysts for organic synthesis
JC Lewis - Acs Catalysis, 2013 - ACS Publications
… Cu(II) and used to catalyze amide bond hydrolysis or kinetic … enantiomer was possible using
the two optimized catalysts. … in catalyst design, protein engineering, and synthetic biology …
the two optimized catalysts. … in catalyst design, protein engineering, and synthetic biology …
Development and Applications of the ReaxFF Reactive Force Field for Biological Systems
… (II) ion which is also commonly found at active sites acts as a catalyst in the hydrolysis of
the peptide bond … The sequence-specific peptide bond cleavage was also studied in R N -(Ser/…
the peptide bond … The sequence-specific peptide bond cleavage was also studied in R N -(Ser/…